A list of articles and resources about the de.NBI network:

  • Git Laborportal 04/17, "Cloud-Computing in der Bioinformatik", by C. Lawerenz, A. Sczyrba and A. Pühler
  • Briefings in Bioinformatics 04/17, "Bioinformatics in Germany: toward a national-level infrastructure", by A. Tauch
  • LaborPraxis 03/17, "Big Data im Life-Science-Labor", by Dr. Ilka Ottleben
  • Gesundheitsindustrie BW 03/17, "de.NBI – Netzwerk für Bioinformatik-Infrastruktur wird weiter ausgebaut", by & O. Kohlbacher
  • BIOSpektrum 01/17, "de.NBI – ein Deutsches Netzwerk für Bioinformatik-Infrastruktur", by A. Pühler
  • Systembiologie 04/16, "Deutsches Netzwerk für Bioinformatik-Infrastruktur – de.NBI", by A. Pühler
  • Systembiologie 04/16, "RNA-Bioinformatik unter einem Dach – das RNA Bioinformatik Service Zentrum", by B. Grüning
  • Systembiologie 04/16, "BRENDA – Von der Datenbank zum Kompetenzzentrum", by D. Schomburg and I. Schomburg
  • Systembiologie 04/16, "NBI-SysBio – Der de.NBI Datenmanagement Knoten", by W. Müller
  • Systembiologie 04/16, "Entwicklung von Software-Lösungen für Mikrobielle Bioinformatik", by A. Goesmann
  • labor&more 02/16, "de.NBI und GFBio - Bioinformatische Infrastrukturen zum Management und zur Analyse großer biologischer Datenmengen in den Lebenswissenschaften", by A. Tauch and F. O. Glöckner
  • BIOSpektrum 02/15, "Deutsches Netzwerk für Bioinformatik-Infrastruktur (de.NBI) - Vernetzung von Bioinformatik-Infrastrukturen in Deutschland", by A. Pühler

A list of articles including manuscripts of the de.NBI special issue in Journal of Biotechnology:

  • Journal of Biotechnology 07/17, "Customized workflow development and data modularization concepts for RNA-Sequencing and metatranscriptome experiments", by S. C. Lott, M. Wolfien, K. Riege, A. Bagnacani, O. Wolkenhauer, S. Hoffmann, W. R. Hess
  • Journal of Biotechnology 07/17, "Challenges and perspectives of metaproteomic data analysis", by R. Heyer, K. Schallert, R. Zoun, B. Becher, G. Saake, D. Benndorf
  • Journal of Biotechnology 07/17, "Phenotype databases for genetic screens in human cells", by B. Rauscher, E. Valentini, U. Hardeland, M. Boutros
  • Journal of Biotechnology 07/17, "From cheminformatics to structure-based design: Web services and desktop applications based on the NAOMI library", by S. Bietz, T. Inhester, F. Lauck, K. Sommer, M. M. von Behren, R. Fährrolfes, F. Flachsenberg, A. Meyder, E. Nittinger, T. Otto, M. Hilbig, K. T. Schomburg, A. Volkamer, M. Rarey
  • Journal of Biotechnology 07/17, "RNA-bioinformatics: Tools, services and databases for the analysis of RNA-based regulation", by R. Backofen, J. Engelhardt, A. Erxleben, J. Fallmann, B. Grüning, U. Ohler, N. Rajewsky, P. F. Stadler
  • Journal of Biotechnology 07/17, "25 years of serving the community with ribosomal RNA gene reference databases and tools", by F. O. Glöckner, P. Yilmaz, C. Quast, J. Gerken, A. Beccati, A. Ciuprina, G. Bruns, P. Yarzac, J. Pepliesc, R. Westram, W. Ludwig
  • Journal of Biotechnology 07/17, "COPASI and its applications in biotechnology", by F. T. Bergmann, S. Hoops, B. Klahn, U. Kummer, P. Mendes, J. Pahle, S. Sahle
  • Journal of Biotechnology 07/17, "Computational proteomics tools for identification and quality control", by D. Kopczynski, A. Sickmann, R. Ahrends
  • Journal of Biotechnology 07/17, "Data management and data enrichment for systems biology projects", by U. Wittig, M. Rey, A. Weidemann, W. Müller
  • Journal of Biotechnology 06/17, "OpenMS – A platform for reproducible analysis of mass spectrometry data", by J. Pfeuffer, T. Sachsenberg, O. Alka, M. Walzer, A. Fillbrunn, L. Nilse, O. Schilling, K. Reinert, O. Kohlbacher
  • Journal of Biotechnology 06/17, "BioInfra.Prot: A Comprehensive Proteomics Workflow Including Data Standardization, Protein Inference, Expression Analysis and Data Publication", by M. Turewicz, M. Kohl, M. Ahrens, G. Mayer, J. Uszkoreit, W. Naboulsi, T. Bracht, D.A. Megger, B. Sitek, K. Marcus, M. Eisenacher
  • Journal of Biotechnology 06/17, "From Plant Genomes to Phenotypes", by M. Bolger M, R. Schwacke, H. Gundlach, T. Schmutzer, J. Chen, D. Arend, M. Oppermann, S. Weise, M. Lange, F. Fiorani, M. Spannagl, U. Scholz, K. Mayer, B. Usadel
  • Journal of Biotechnology 05/17, "Bioinformatics can boost metabolomics research", by R. Meier, C. Ruttkies, H. Treutler, S. Neumann
  • Journal of Biotechnology 05/17, "Use of CellNetAnalyzer in biotechnology and metabolic engineering", by von A. von Kamp, S. Thiele, O. Hädicke, S. Klamt
  • Journal of Biotechnology 05/17, "Mobilization and integration of bacterial phenotypic data-Enabling next generation biodiversity analysis through the BacDive metadatabase", by L. C. Reimer, C. Söhngen, A. Vetcininova, J. Overmann
  • Journal of Biotechnology 04/17, "The BRENDA enzyme information system–From a database to an expert system", by I. Schomburg, L. Jeske, M. Ulbrich, S. Placzek, A. Chang, D. Schomburg