RNA Bioinformatics Center (RBC)

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About

The "RNA Bioinformatics Center" (RBC) is composed of all major RNA bioinformatics groups in Germany located in three sites: University of Freiburg, University of Leipzig and Max Delbruck Center - Berlin. The center deals with all RNA-related data not limited to transcriptome analysis but also RNA structure analysis, prediction of ncRNA targets, definition and classification of RNA transcripts and the analysis of protein-RNA interactions.

Services

The mission of the RNA Bioinformatics center is to support all RNA-related research within de.NBI. To this end, the center provides training and tools for researchers interested in RNA. The center maintains and develops an integrated, easily accessible RNA analysis workbench, which can be used on high-performance computing (HPC) environments of the center members, downloaded and installed locally, or deployed on any HPC-like environment. In addition, RBC collaborates with other Bioinformatics Centers and relevant scientific communities (such as Galaxy and other open source bioinformatics communities) to enable maximal usefulness, interconnectivity, and added value of the developed infrastructure. Furthermore, the center uses this infrastructure as foundation for a learning and teaching environment that fosters an awareness for the importance of RNA analyses.

Developments

The center is adding more tools to the toolbox constantly. The workflows developed at the center become instantly available to the public. In addition, the RNA Bioinformatics center will be providing training and workshops at all of the three sites throughout the year.

Project Management

Backofen Website
Prof. Dr. Rolf Backofen (Coordinator)
Institut für Informatik
Albert-Ludwigs-Universität
Georges-Koehler-Allee, Geb 106
D-79110 Freiburg, Germany
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Ohlerlab Website
Prof. Dr. Uwe Ohler (Partner)
Berlin Institute for Medical Systems Biology (BIMSB)
Max Delbrück Center (MDC)
Robert-Rössle-Straße 10
13125 Berlin, Germany
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Rajewsky Website
Prof. Dr. Nikolaus Rajewsky (Partner)
Berlin Institute for Medical Systems Biology (BIMSB)
Max Delbrück Center (MDC)
Robert-Rössle-Straße 10
13125 Berlin, Germany
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Stadler Website
Prof. Dr. Peter F. Stadler (Partner)
Institut für Informatik
Universität Leipzig
Härtelstr. 16-18
D-04107 Leipzig
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Supplementary Information

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SAB-Poster
RNA Bioinform.
SAB-Poster
Work of Leipzip
SAB-Poster
Berlin Institute
SAB-Poster
de.Stair
SAB-Poster
de.Stair
RNA Seq
SAB-Poster
de.NBI Epi
SAB-Poster
de.NBI Epi
BIMSB