514206

Bielefeld-Gießen Resource Center for Microbial Bioinformatics (BiGi)

Date Topic Location
20-26 Sep 2015 de.NBI Late Summer School 2015 in Microbial Bioinformatics Gießen
03-04 Nov 2015 CLC workshop Gießen
16-17 Nov 2015 High-throughput genome analysis and comparative genomics Gießen
23-25 Nov 2015 Introduction into targeted and untargeted metagenome analysis Bielefeld
29 Aug-2 Sep 2016 Targeted and Untargeted Metagenome Analysis Bielefeld
12 Sep 2016 Cloud Computing Tutorial Berlin
21-23 Sep 2016 2nd Genomics training course Gießen
26-30 Sep 2016 de.NBI Summer School 2016 - From Big Data to Big Insights Dagstuhl castle
(Wadern)
13 Oct 2016 Polyomics data integration and analysis Bielefeld
07-09 Jun 2017 3rd Genomics training course Gießen
16 Jun 2017 MetaProteomeAnalyzer Workshop - 2nd International Metaproteomics Symposium Alghero
25 Jun-01 Jul 2017 de.NBI Summer School on Cloud Computing for Bioinformatics Gießen
07 Sep 2017 Analysis, visualization and integration of multi-level omics data Bielefeld
22-24 Nov 2017 de.NBI - CeBiTec Nanopore Best Practice Workshop Bielefeld
28 Nov 2017 OpenStack Cloud Hands-On Gießen
23 Jan 2018 MetaProteomeAnalyzer Workshop 2018 Magdeburg
07-13 Mar 2018 Applied Metaproteomics Workshop 2018 Magdeburg
08 Mar 2018 Getting Started with the de.NBI-Cloud Bielefeld
27-29 Mar 2018 3rd de.NBI Training Course on Metagenome Analysis Bielefeld
23-25 Apr 2018 4th de.NBI Genomics training course Gießen
08 Sep 2018 Modern and scalable tools for efficient analysis of very large metagenomic datasets - ECCB 2018 Athens

Bioinformatics for Proteomics (BioInfra.Prot)

Date Topic Location
16-18 Sep 2015 8th Open MS User Meeting Bochum
27 Sep 2015 Fundamentals of Proteome Bioinformatics Revisited Dortmund
28 Feb 2016 Spezielle Aspekte von Bioinformatik - Methoden in der MS–basierten Proteomik Hamburg
26-30 Sep 2016 de.NBI Summer School 2016 - From Big Data to Big Insights Dagstuhl castle
(Wadern)
21 Nov 2016 Differential analysis of proteomic data using R Bochum
10 Jan 2017 Deployment of bioinformatics tools and services from Computational Proteomics – Part II: Standard formats in proteomics, data conversions and repository upload  EuBIC Winter School Semmering
05 Mar 2017 Lipidomics: A Workshop about Lipid Function & Analysis Kiel
03 Apr 2017 Special Aspects of Bioinformatics for Proteomics - Proteomic Forum 2017 Potsdam
04 Apr 2017 Protein identification in mass spectrometry data using SearchGUI and PeptideShaker - Proteomic Forum 2017 Potsdam
25 Jun-01 Jul 2017 de.NBI Summer School on Cloud Computing for Bioinformatics Gießen
12 Nov 2017 Computational lipidomics: identification and quantification of lipids Borstel
13 Nov 2017 Differential analysis of quantitative proteomics data using R Bochum
09 Mar 2018 Analysis of Mass Spectrometry and Sequence Data with KNIME - KNIME Spring Summit Berlin
11 Mar 2018 Computational Proteomics Workshop - DGMS2018 Saarbrücken

Center for Biological Data (BioData)

Date Topic Location
13-14 Oct 2015 Training in BRENDA/BacDive modules Braunschweig
01-04 Dec 2015 ARB/SILVA and BacDive: Training on microbial phylogeny and diversity analysis Bremen
02 Nov 2016 Introduction into the bacterial diversity metadatabase BacDive Braunschweig
22-25 Nov 2016 From Primer to Paper: Training in Biodiversity Analysis using NGS Amplicon Data Bremen
30-31 Mar 2017 BRENDA Workshop 2017 Braunschweig
11-12 Oct 2017 Introduction to BRENDA & ProteinPlus Braunschweig
06-10 Nov 2017 From Primer to Paper: Training in Microbial Biodiversity Analysis Bremen
15-16 Nov 2017 de.NBI - GFBio & Friends Data Management Workshop Bremen
15 Aug 2018 Microbiome Analysis with QIIME 2 - ISME17 Leipzig
03-07 Sep 2018 de.NBI Summer School 2018 - Riding the Data Life Cycle Braunschweig

Center for Integrative Bioinformatics (CIBI)

Date Topic Location
16-18 Sep 2015 8th OpenMS User Meeting Bochum
27 Sep 2015 Fundamentals of Proteome Bioinformatics Revisited Dortmund
12-22 Jan 2016 KNIME BioInformatics Hackathon Konstanz
22-26 Feb 2016 KNIME Spring Summit Workshop 2016 Berlin
28 Feb 2016 Von Spektren zu Ergebnissen: Effiziente Analyse von massenspektrometrischen Daten mit Workflows Hamburg
13-18 Mar 2016 OpenMS Developer Meeting Milford Hall
30 Mar-01 Apr 2016 SeqAn de.NBI User Meeting Berlin
26 Apr 2016 Workflow based metabolomics a de.NBI teaching event at the Metabolomics in Biomedical Research workshop Tübingen
05-14 Jul 2016 Hackathon - KNIME & Image Processing Konstanz
12 Sep 2016 Label-free quantification using OpenMS and workflows Berlin
21-23 Sep 2016 9th OpenMS User Meeting Tübingen
26-30 Sep 2016 de.NBI Summer School 2016 - From Big Data to Big Insights Dagstuhl castle
(Wadern)
08-09 Dec 2016 IPB Metabolomics workshop 2016 - Christmas Edition Halle (Saale)
06-16 Dec 2016 Hackathon – Fiji, ImageJ, and KNIME development Dresden
12 Jan 2017 Label-free quantification and quality control with OpenMS Semmering
17 Mar 2017 Introduction into the Analysis of Mass Spectrometry and Sequence Data with KNIME Berlin
03 Apr 2017 OpenMS & KNIME - Proteomic Forum 2017 Potsdam
01-03 May 2017 Proteomics and Metabolomics with OpenMS Boston
02-03 May 2017 MoMA Workshop Basel
18-24 Jun 2017 Fiji Developer Training (Learnathon) Dresden
25 Jun-01 Jul 2017 de.NBI Summer School on Cloud Computing for Bioinformatics Gießen
26-28 Jul 2017 Data Science for the Life Sciences Konstanz
07-11 Aug 2017 KNIME Cluster Hackathon Konstanz
21-25 Aug 2017 Deep Learning with Keras Dresden
18 Sep 2017 Computational Mass Spectrometry - GCB 2017 Tübingen
20-29 Sep 2017 de.NBI, DAIS & KNIME Hackathon Konstanz
25-27 Sep 2017 SeqAn User Meeting 2017 Halle
25-27 Sep 2017 OpenMS User Meeting 2017 Halle
03-16 Dec 2017 Hackathon – Fiji, ImageJ, and KNIME development 2017 Dresden
09-12 Jan 2018 Developer training: Third-party tool integration and method development in OpenMS - EuBIC 2018 developer's meeting Ghent
05-08 Mar 2018 de.NBI Winter School on Computational Metabolomics Lutherstadt Wittenberg
09 Mar 2018 Analysis of Mass Spectrometry and Sequence Data with KNIME - KNIME Spring Summit Berlin
11-18 Mar 2018 SeqAn Developer Retreat Mallorca
02-06 Apr 2018 OpenMS Developer Meeting 2018 Troia
04-08 Jun 2018 DAIS Learnathon 2018 Dresden
23-25 Jul 2018 Data Science for Life Science Konstanz
03-07 Sep 2018 CIBI - KNIME Cluster Hackathon Konstanz
08 Sep 2018 Computational Mass Spectrometry with OpenMS - From Algorithms to Integrated Workflows - ECCB 2018 Athens
09 Sep 2018 From an application to a fully integrated workflow – Comprehensive software engineering with SeqAn - ECCB 2018 Athens

de.NBI Systems Biology Service Center (de.NBI-SysBio)

Date Topic Location
20-26 Sep 2015 de.NBI Late Summer School 2015 in Microbial Bioinformatics Gießen
30-31 May 2016 Kinetics on the move: practical workshop on data and tools for quantitative modeling Heidelberg
16 Sep 2016 ICSB2016 Tutorial: Modelling and Simulation Tools in Systems Biology Barcelona
06 Aug 2017 COMBINE Tutorial - Modelling and Simulation Tools in Systems Biology - ICSB 2017 Blacksburg
07 Aug 2017 COPASI Tutorial - ICSB 2017 Blacksburg
12-13 Sep 2017 Stoichiometric and kinetic modeling of biochemical networks using CellNetAnalyzer and COPASI Heidelberg
22-23 Nov 2017 FAIRDOM - LiSyM - de.NBI Data Structuring Course Hünfeld
24-26 Apr 2018 Tools for Systems biology modeling and data exchange: COPASI, CellNetAnalyzer, SABIO-RK, SEEK Magdeburg
04 Jul 2018 How to share FAIR — The FAIRDOM Data and Model Management Practice – SBMC 2018 Bremen
03-07 Sep de.NBI Summer School 2018 - Riding the Data Life Cycle Braunschweig

German Crop BioGreenformatics Network (GCBN)

Date Topic Location
07-08 Dec 2015 Data Management for Plant Genomics & Phenomics - Standards, Tools and Infrastructures München
05-07 Oct 2016 NGS Workshop 2016 - The path from raw sequences to biological conclusions Aachen
19-21 Oct 2016 Big Data Training Course in Plant Genomics Gatersleben
11-12 Sep 2017 Phylogeny for Beginners: a two day hands on tutorial München
25-27 Sep 2017 PLANT 2030 Summer School – Basic Bioinformatics training for Biologists Gatersleben
22-24 Nov 2017 de.NBI - CeBiTec Nanopore Best Practice Workshop Bielefeld
13 Jun 2018 FAIR Data Management for Plant Genomics & Phenomics: Standards, Tools and Infrastructures - IB 2018 Harpenden
03-07 Sep 2018 de.NBI Summer School 2018 - Riding the Data Life Cycle Braunschweig

Heidelberg Center for Human Bioinformatics (HD-HuB)

Date Topic Location
07-08 Oct 2015 Data Interpretation for NGS Data in Cancer Research Heidelberg
02-04 Dec 2015 Bioimage Analysis Workshop Heidelberg
10-15 Jul 2016 CSAMA 2016 - Statistics and Computing in Genome Data Science Padova
19-21 Sep 2016 Software Carpentry Workshop Heidelberg
28-30 Sep 2016 Data Interpretation of RNASeq and Bisulfite Sequencing Data in Cancer Research Heidelberg
11-12 Oct 2016 Microscopy Image Analysis Course Heidelberg
13-14 Oct 2016 Data Interpretation of Whole-Genome and Exome Sequencing Data in Cancer Research Heidelberg
26-27 Oct 2016 Software Carpentry's Workshop Würzburg
05-06 Dec 2016 2nd de.NBI Bioimage Analysis Workshop Heidelberg
03-04 Apr 2017 Advanced R Programming Heidelberg
11-16 Jun 2017 CSAMA 2017 - Statistical Data Analysis for Genome Scale Biology Bressanone-Brixen
19-20 Jun 2017 Software Carpentry Course Berlin
26-28 Jun 2017 Introduction to Linux & Version Control Heidelberg
25 Jun-01 Jul 2017 de.NBI Summer School on Cloud Computing for Bioinformatics Gießen
03-04 Jul 2017 Workflow Management with CWL: Bring your own Workflow Heidelberg
26-28 Jul 2017 Introduction to Python programming Heidelberg
04-05 Sep 2017 Software Carpentry Würzburg
27-29 Sep 2017 Data Interpretation of RNASeq and Bisulfite Sequencing Data in Cancer Research Heidelberg
18-20 Oct 2017 Software Carpentry Workshop Heidelberg
27-29 Nov 2017 3rd de.NBI Bioimage Analysis Workshop Heidelberg
30 Nov-01 Dec 2017 DNA Methylation: Design to Discovery Saarbrücken
30-31 Jan 2018 Introduction to Command Line Computing Heidelberg
26-28 Feb 2018 Protein Bioinformatics Course for Beginners 2018 Heidelberg
04-05 Apr 2018 Introduction to Python Programming Heidelberg
02-04 May 2018 Data Carpentry Course Heidelberg
28-29 May 2018 Data Carpentry Dublin
12-13 Jun 2018 Machine Learning in R / mlR Workshop Heidelberg
26-27 Jun 2018 Introduction to Linux Command Line & Basic Scripting Heidelberg
08-13 Jul 2018 CSAMA 2018 - Statistical Data Analysis for Genome Scale Biology Bressanone-Brixen
17-20 Jul 2018 Metagenomics Bioinformatics Hinxton
06-07 Sep 2018 Introduction to data analysis in Python Heidelberg

RNA Bioinformatics Center (RBC)

Date Topic Location
16-17 Jul 2015 RNAseq workshop Freiburg
14-15 Sep 2015 Bioinformatics Hackathon Berlin
20-26 Sep 2015 de.NBI Late Summer School 2015 in Microbial Bioinformatics Gießen
21-25 Sep 2015 NGS hands-on workshop Freiburg
18-24 Oct 2015 Computational Genomics hands-on workshop Berlin
15-16 Dec 2015 Python workshop Freiburg
22-26 Feb 2016 Galaxy workshop on HTS data analysis Freiburg
17-18 Aug 2016 BIMSB Galaxy Workshop – Using Galaxy for RNA-seq analysis Berlin
12-23 Sep 2016 Computational genomics approaches to precision medicine Berlin
19-23 Sep 2016 2nd Galaxy Workshop on HTS data analysis Freiburg
26-30 Sep 2016 Summer School: RNA-Seq Leipzig
27-28 Sep 2016 Hackathon on Conda packaging for Proteomics Online
06-07 Oct 2016 Galaxy training contribution fest Online
02-03 Nov 2016 Bioconda Contribution Fest Online
15-16 Dec 2016 Galaxy RNA-sequencing data analysis workshop Freiburg
09-10 Jan 2017 QIIME Contribution Fest Online
16-19 Jan 2017 European Galaxy Developer Workshop Illkirch/Strasbourg
13-17 Feb 2017 3rd Galaxy High-Throughput-Sequencing (HTS) data analysis workshop Freiburg
04-20 Mar 2017 6th Programming for Evolutionary Biology Course Leipzig
09-10 Mar 2017 1st Freiburg Software Carpentry Course Freiburg
31 Mar 2017 Using Next Generation Sequencing Data Analysis for the Clinic - CASyM winter school of Systems Medicine Ljubljana
04-05 Apr 2017 de.NBI - ELIXIR AAI Codefest - Make your services accessible via ELIXIR AAI Freiburg
22-24 May 2017 ELIXIR/GOBLET/GTN hackathon for Galaxy training material re-use Cambridge
28 Jun 2017 Advanced customisation of a Galaxy instance - GCC Montpellier
28 Jun 2017 Galaxy for Proteomics - GCC Montpellier
28 Jun 2017 Galaxy for Training & Education - GCC Montpellier
28 Jun 2017 How to analyze metagenomic and amplicon data in Galaxy - GCC Montpellier
29 Jun 2017 BIMSB Galaxy Course - using Galaxy for RNA-seq analysis Berlin
21 Jul 2017 Making Galaxy work for you - ISMB 2017 Prag
18-22 Sep 2017 4th Galaxy high-throughput sequencing (HTS) data analysis workshop Freiburg
25-29 Sep 2017 de.NBI Late Summer School 2017 - Computational genomics and RNA biology Berlin
04-06 Oct 2017 A primer for RNA-Seq processing, interpreting and visualization Freiburg
06-07 Nov 2017 Virtualized Research Environments - Provisioning and Data Management Freiburg
04 Dec 2017 Introduction to Software Deployment in Virtualized Research Environments Freiburg
08-12 Jan 2018 European Galaxy Administrator Workshop 2018 Oslo
20 Feb 2018 Single cell RNA-seq processing and imputation tutorial Berlin
26 Feb-02 Mar 2018 5th Galaxy high-throughput sequencing (HTS) data analysis workshop Freiburg
07 Mar 2018 Introduction to RNA-Seq data analysis with Galaxy Kiel
21-23 May 2018 Workshop for Galaxy training material and skills improvement Norwich
23-25 May 2018 Computational Genomics: Bisulfite-seq analysis and data integration Berlin
28-29 May 2018 Data Carpentry Dublin
27-29 Jun 2018 A primer for RNA-Seq processing, interpreting and visualization Jena
17 Aug 2018 GTN collaboration fest on metagenomics (online) Online
04 Sep 2018 RNA-Seq data analysis with Galaxy for clinical applications - GMDS 2018 Osnabrück
05 Sep 2018 Galaxy for Proteomics Freiburg
10 Sep 2018 Galaxy workshop - ECCB 2018 Athens

Associated Partners (CAU)

Date Topic Location
05-08 Mar 2018 de.NBI Winter School on Computational Metabolomics Lutherstadt Wittenberg
05 Mar 2018 Eukaryote genome annotation Kiel
06 Mar 2018 Introduction to genome-wide association studies (GWAS) Kiel
16 May 2018 Phylogenetic reconstruction Kiel

514206

2018 Topic Location
08-12 Jan European Galaxy Administrator Workshop 2018 Oslo
09-12 Jan Developer training: Third-party tool integration and method development in OpenMS - EuBIC 2018 developer's meeting Ghent
23 Jan MetaProteomeAnalyzer Workshop 2018 Magdeburg
30-31 Jan Introduction to Command Line Computing Heidelberg
20 Feb Single cell RNA-seq processing and imputation tutorial Berlin
26 Feb-02 Mar 5th Galaxy high-throughput sequencing (HTS) data analysis workshop Freiburg
26-28 Feb Protein Bioinformatics Course for Beginners 2018 Heidelberg
05-08 Mar de.NBI Winter School on Computational Metabolomics Lutherstadt Wittenberg
05 Mar Eukaryote genome annotation Kiel
06 Mar Introduction to genome-wide association studies (GWAS) Kiel
07 Mar Introduction to RNA-Seq data analysis with Galaxy Kiel
07-13 Mar Applied Metaproteomics Workshop 2018 Magdeburg
08 Mar Getting Started with the de.NBI-Cloud Bielefeld
09 Mar Analysis of Mass Spectrometry and Sequence Data with KNIME - KNIME Spring Summit Berlin
11 Mar Computational Proteomics Workshop - DGMS2018 Saarbrücken
11-18 Mar SeqAn Developer Retreat Mallorca
27-29 Mar 3rd de.NBI Training Course on Metagenome Analysis Bielefeld
02-06 Apr OpenMS Developer Meeting 2018 Troia
04-05 Apr Introduction to Python Programming Heidelberg
23-25 Apr 4th de.NBI Genomics training course Gießen
24-26 Apr Tools for Systems biology modeling and data exchange: COPASI, CellNetAnalyzer, SABIO-RK, SEEK Magdeburg
30 Apr-02 May Computation and statistics for mass spectrometry and proteomics Boston
02-04 May Data Carpentry Course Heidelberg
16 May Phylogenetic reconstruction Kiel
21-23 May Workshop for Galaxy training material and skills improvement Norwich
23-25 May Computational Genomics: Bisulfite-seq analysis and data integration Berlin
28-29 May Data Carpentry Dublin
04-08 Jun DAIS Learnathon 2018 Dresden
12-13 Jun Machine Learning in R / mlR Workshop Heidelberg
13 Jun FAIR Data Management for Plant Genomics & Phenomics: Standards, Tools and Infrastructures - IB 2018 Harpenden
26-27 Jun Introduction to Linux Command Line & Basic Scripting Heidelberg
27-29 Jun A primer for RNA-Seq processing, interpreting and visualization Jena
04 Jul How to share FAIR — The FAIRDOM Data and Model Management Practice – SBMC 2018 Bremen
08-13 Jul CSAMA 2018 - Statistical Data Analysis for Genome Scale Biology Bressanone-Brixen
17-20 Jul Metagenomics Bioinformatics Hinxton
23-25 Jul Data Science for Life Science Konstanz
15 Aug Microbiome Analysis with QIIME 2 - ISME17 Leipzig
17 Aug GTN collaboration fest on metagenomics (online) Online
03-07 Sep de.NBI Summer School 2018 - Riding the Data Life Cycle Braunschweig
03-07 Sep CIBI - KNIME Cluster Hackathon Konstanz
04 Sep RNA-Seq data analysis with Galaxy for clinical applications - GMDS 2018 Osnabrück
05 Sep Galaxy for Proteomics Freiburg
06-07 Sep Introduction to data analysis in Python Heidelberg
08 Sep Computational Mass Spectrometry with OpenMS - From Algorithms to Integrated Workflows - ECCB 2018 Athens
08 Sep Modern and scalable tools for efficient analysis of very large metagenomic datasets - ECCB 2018 Athens
09 Sep From an application to a fully integrated workflow – Comprehensive software engineering with SeqAn - ECCB 2018 Athens
10 Sep Galaxy workshop - ECCB 2018 Athens

 

2017 Topic Location
09-10 Jan QIIME Contribution Fest Online
10 Jan Deployment of bioinformatics tools and services from Computational Proteomics – Part II: Standard formats in proteomics, data conversions and repository upload  EuBIC Winter School Semmering
12 Jan Label-free quantification and quality control with OpenMS Semmering
16-19 Jan European Galaxy Developer Workshop Illkirch/Strasbourg
13-17 Feb 3rd Galaxy High-Throughput-Sequencing (HTS) data analysis workshop Freiburg
04-20 Mar 6th Programming for Evolutionary Biology Course Leipzig
05 Mar Lipidomics: A Workshop about Lipid Function & Analysis Kiel
09-10 Mar 1st Freiburg Software Carpentry Course Freiburg
17 Mar Introduction into the Analysis of Mass Spectrometry and Sequence Data with KNIME Berlin
20-26 Mar SeqAn Developer Retreat Lissabon
26-31 Mar OpenMS Developer Retreat Troia
30-31 Mar BRENDA Workshop 2017 Braunschweig
31 Mar Using Next Generation Sequencing Data Analysis for the Clinic - CASyM winter school of Systems Medicine Ljubljana
03 Apr Special Aspects of Bioinformatics for Proteomics - Proteomic Forum 2017 Potsdam
03 Apr OpenMS & KNIME - Proteomic Forum 2017 Potsdam
03-04 Apr Advanced R Programming Heidelberg
04 Apr Protein identification in mass spectrometry data using SearchGUI and PeptideShaker - Proteomic Forum 2017 Potsdam
04-05 Apr de.NBI - ELIXIR AAI Codefest - Make your services accessible via ELIXIR AAI Freiburg
01-03 May Proteomics and Metabolomics with OpenMS Boston
02-03 May MoMA Workshop Basel
22-24 May ELIXIR/GOBLET/GTN hackathon for Galaxy training material re-use Cambridge
07-09 Jun 3rd Genomics training course Gießen
11-16 Jun CSAMA 2017 - Statistical Data Analysis for Genome Scale Biology Bressanone-Brixen
16 Jun MetaProteomeAnalyzer Workshop - 2nd International Metaproteomics Symposium Alghero
18-24 Jun Fiji Developer Training (Learnathon) Dresden
19-20 Jun Software Carpentry Course Berlin
25 Jun-01 Jul de.NBI Summer School on Cloud Computing for Bioinformatics Gießen
26-28 Jun Introduction to Linux & Version Control Heidelberg
28 Jun Advanced customisation of a Galaxy instance - GCC Montpellier
28 Jun Galaxy for Proteomics - GCC Montpellier
28 Jun Galaxy for Training & Education - GCC Montpellier
28 Jun How to analyze metagenomic and amplicon data in Galaxy - GCC Montpellier
29 Jun BIMSB Galaxy Course - using Galaxy for RNA-seq analysis Berlin
03-04 Jul Workflow Management with CWL: Bring your own Workflow Heidelberg
21 Jul Making Galaxy work for you - ISMB 2017 Prag
26-28 Jul Introduction to Python programming Heidelberg
26-28 Jul Data Science for the Life Sciences Konstanz
06 Aug COMBINE Tutorial - Modelling and Simulation Tools in Systems Biology - ICSB 2017 Blacksburg
07 Aug COPASI Tutorial - ICSB 2017 Blacksburg
07-11 Aug KNIME Cluster Hackathon Konstanz
21-25 Aug Deep Learning with Keras Dresden
04-05 Sep Software Carpentry Würzburg
07 Sep Analysis, visualization and integration of multi-level omics data Bielefeld
11-12 Sep Phylogeny for Beginners: a two day hands on tutorial München
12-13 Sep Stoichiometric and kinetic modeling of biochemical networks using CellNetAnalyzer and COPASI Heidelberg
18 Sep Computational Mass Spectrometry - GCB 2017 Tübingen
18-22 Sep 4th Galaxy high-throughput sequencing (HTS) data analysis workshop Freiburg
20-29 Sep de.NBI, DAIS & KNIME Hackathon Konstanz
25-27 Sep PLANT 2030 Summer School – Basic Bioinformatics training for Biologists Gatersleben
25-27 Sep SeqAn User Meeting 2017 Halle
25-27 Sep OpenMS User Meeting 2017 Halle
25-29 Sep de.NBI Late Summer School 2017 - Computational genomics and RNA biology Berlin
27-29 Sep Data Interpretation of RNASeq and Bisulfite Sequencing Data in Cancer Research Heidelberg
04-06 Oct A primer for RNA-Seq processing, interpreting and visualization Freiburg
11-12 Oct Introduction to BRENDA & ProteinPlus Braunschweig
18-20 Oct Software Carpentry Workshop Heidelberg
06-07 Nov Virtualized Research Environments - Provisioning and Data Management Freiburg
06-10 Nov From Primer to Paper: Training in Microbial Biodiversity Analysis Bremen
12 Nov Computational lipidomics: identification and quantification of lipids Borstel
13 Nov Differential analysis of quantitative proteomics data using R Bochum
15-16 Nov de.NBI - GFBio & Friends Data Management Workshop Bremen
22-23 Nov FAIRDOM - LiSyM - de.NBI Data Structuring Course Hünfeld
22-24 Nov de.NBI - CeBiTec Nanopore Best Practice Workshop Bielefeld
27-29 Nov 3rd de.NBI Bioimage Analysis Workshop Heidelberg
28 Nov OpenStack Cloud Hands-On Gießen
30 Nov-01 Dec DNA Methylation: Design to Discovery Saarbrücken
04 Dec Introduction to Software Deployment in Virtualized Research Environments Freiburg
07 Dec Tool-Training for Proteomics Bochum
03-16 Dec Hackathon – Fiji, ImageJ, and KNIME development 2017 Dresden

 

2016 Topic Location
12-22 Jan KNIME BioInformatics Hackathon Konstanz
22-26 Feb Galaxy workshop on HTS data analysis Freiburg
22-26 Feb KNIME Spring Summit Workshop 2016 Berlin
28 Feb Spezielle Aspekte von Bioinformatik - Methoden in der MS–basierten Proteomik Hamburg
28 Feb Von Spektren zu Ergebnissen: Effiziente Analyse von massenspektrometrischen Daten mit Workflows Hamburg
13-18 Mar OpenMS Developer Meeting Milford Hall
30 Mar-01 Apr SeqAn de.NBI User Meeting Berlin
26 Apr Workflow based metabolomics a de.NBI teaching event at the Metabolomics in Biomedical Research workshop Tübingen
30-31 May Kinetics on the move: practical workshop on data and tools for quantitative modeling Heidelberg
05-14 Jul Hackathon - KNIME & Image Processing Konstanz
10-15 Jul CSAMA 2016 - Statistics and Computing in Genome Data Science Padova
17-18 Aug BIMSB Galaxy Workshop – Using Galaxy for RNA-seq analysis Berlin
29 Aug-2 Sep Targeted and Untargeted Metagenome Analysis Bielefeld
12 Sep Cloud Computing Tutorial Berlin
12 Sep Label-free quantification using OpenMS and workflows Berlin
12-23 Sep Computational genomics approaches to precision medicine Berlin
16 Sep ICSB2016 Tutorial: Modelling and Simulation Tools in Systems Biology Barcelona
19-21 Sep Software Carpentry Workshop Heidelberg
19-23 Sep 2nd Galaxy Workshop on HTS data analysis Freiburg
21-23 Sep 9th OpenMS User Meeting Tübingen
21-23 Sep 2nd Genomics training course Gießen
26-30 Sep de.NBI Summer School 2016 - From Big Data to Big Insights Dagstuhl castle
(Wadern)
26-30 Sep Summer School: RNA-Seq Leipzig
27-28 Sep Hackathon on Conda packaging for Proteomics Online
28-30 Sep Data Interpretation of RNASeq and Bisulfite Sequencing Data in Cancer Research Heidelberg
05-07 Oct NGS Workshop 2016 - The path from raw sequences to biological conclusions Aachen
06-07 Oct Galaxy training contribution fest Online
11-12 Oct Microscopy Image Analysis Course Heidelberg
13 Oct Polyomics data integration and analysis Bielefeld
13-14 Oct Data Interpretation of Whole-Genome and Exome Sequencing Data in Cancer Research Heidelberg
19-21 Oct Big Data Training Course in Plant Genomics Gatersleben
26-27 Oct Software Carpentry's Workshop Würzburg
02 Nov Introduction into the bacterial diversity metadatabase BacDive Braunschweig
02-03 Nov Bioconda Contribution Fest Online
21 Nov Differential analysis of proteomic data using R Bochum
22-25 Nov From Primer to Paper: Training in Biodiversity Analysis using NGS Amplicon Data Bremen
05-06 Dec 2nd de.NBI Bioimage Analysis Workshop Heidelberg
08-09 Dec IPB Metabolomics workshop 2016 - Christmas Edition Halle (Saale)
06-16 Dec Hackathon – Fiji, ImageJ, and KNIME development Dresden
15-16 Dec Galaxy RNA-sequencing data analysis workshop Freiburg

 

2015 Topic Location
16-17 Jul RNAseq workshop Freiburg
14-15 Sep Bioinformatics Hackathon Berlin
16-18 Sep 8th Open MS User Meeting Bochum
20-26 Sep de.NBI Late Summer School 2015 in Microbial Bioinformatics Gießen
21-25 Sep NGS hands-on workshop Freiburg
27 Sep Fundamentals of Proteome Bioinformatics Revisited Dortmund
07-08 Oct Data Interpretation for NGS Data in Cancer Research Heidelberg
13-14 Oct Training in BRENDA/BacDive modules Braunschweig
18-24 Oct Computational Genomics hands-on workshop Berlin
03-04 Nov CLC workshop Gießen
16-17 Nov High-throughput genome analysis and comparative genomics Gießen
23-25 Nov Introduction into targeted and untargeted metagenome
analysis
Bielefeld
01-04 Dec ARB/SILVA and BacDive: Training on microbial phylogeny and diversity analysis Bremen
02-04 Dec Bioimage Analysis Workshop Heidelberg
07-08 Dec Data Management for Plant Genomics & Phenomics - Standards, Tools and Infrastructures München
15-16 Dec Python workshop Freiburg

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2018 Topic Location
17-21 Sep 6th Galaxy HTS data analysis workshop Freiburg
19-21 Sep de.NBI - CeBiTec Nanopore Best Practice Workshop 2018 Bielefeld
19-21 Sep SeqAn User Meeting 2018 Berlin
19-21 Sep OpenMS User Meeting 2018 Berlin
19-21 Sep de.NBI - KNIME User Meeting 2018 Berlin
19-21 Sep MASH User Meeting 2018 Berlin
24-28 Sep Deep Learning Bootcamp 2018 Dresden
25 Sep Label-free quantification with OpenMS - GCB 2018 Vienna
25 Sep SeqAn3 – a modern C++ library for efficient sequence analysis - GCB 2018 Vienna
25 Sep Cloud Computing Tutorial - GCB 2018 Vienna
08-10 Oct Workflow management systems in the cloud Gießen
09-10 Oct Galaxy for Proteomics Prague
16 Oct Tool-Training for Proteomics Bochum
16-18 Oct Software Carpentry Course Heidelberg
17-18 Oct Galaxy for NGS data analysis Amsterdam
27 Oct COMBINE & de.NBI Tutorial: Modelling and Simulation Tools in Systems Biology – ICSB 2018 Lyon
27 Oct Advanced modeling with COPASI - ICSB 2018 Lyon
29-31 Oct 1st de.NBI Cloud User Meeting Bielefeld
11 Nov Omics data analysis with R for Beginners - Lipidomicsforum 2018 Dortmund
11 Nov Hands-On Workshop on Lipidomics Software & Pipelines - Lipidomicsforum 2018 Dortmund
13 Nov Polyomics data integration and analysis Bielefeld
19 Nov Differential analysis of quantitative proteomics data using R Bochum
19-20 Nov European Galaxy Days 2018 Freiburg

 Download: Training course insert for de.NBI flyer

Planned for 18 Topic Location
Q4 Microscopy Image Analysis Course Heidelberg
Q4 Data Interpretation of RNASeq and Bisulfite Sequencing Data in Cancer Research Heidelberg
Q4 Hackathon – Fiji, ImageJ, and KNIME development Dresden
Q4 DNA Methylation: Design to Discovery Saarbrücken
Q4 4th Course on Bioimage Analysis Heidelberg
Q4 From Primer to Paper: Training in Microbial Biodiversity Analysis Bremen

514206

de.NBI collects and hosts educational materials related to bioinformatics, some of which have been developed specifically within the project. Training activities are focused on supporting and training end users through training courses, webinars, and online training. Life science researchers will thus be enabled to exploit their data more effectively by applying tools, standards and compute services provided by de.NBI. The training pages list training resources offered by all de.NBI units with short descriptions including information on the corresponding training course and to the corresponding tools.

To effectively coordinate training courses, de.NBI has established the Special Interest Group 3 (SIG3 - Training and Education). SIG3 is composed of training experts from each de.NBI unit. The SIG3 members meet twice a year to share experience, coordinate training activities and plan new training activities.

We also welcome requests for additional materials.

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