MDC-Berlin: Rajewsky Lab
Focus on post-transcriptional gene regulation by small RNAs (for example microRNAs) and RNA binding proteins.
Web-services:
PicTar
- identification of microRNA targets Databases
doRiNA
- RNA interactions in post-transcriptional regulation. Find this service in BioTools here.
circBase
- explore public circRNA datasets and download tools to discover circRNAs in RNA-seq data. Contact:
pSILAC
- Genome-wide changes in protein synthesis induced by microRNAs
Tools for download:
miReduce
- motif based fold change profile of genome wide expression levels
Discrover
- motif discovery method to find binding sites of nucleic acid binding proteins
RNA competition
- competition between target sites of regulators shapes post-transcriptional gene regulation.