de.STAIR-Rostock - TRAPLINE
TRAPLINE (Transparent, Reproducible and Automated analysis PipeLINE) is an RNAseq data processing, evaluation, and prediction tool optimized for Illumina FASTQ reads, and other sequencing platforms like SOLiD or Solexa. Predictions are based on modules which are able to identify protein-protein interactions, miRNA targets and alternatively splicing variants or promoter enriched sites. TRAPLINE is available in the Galaxy web platform
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