SABIO-RK - A database for biochemical reactions and their kinetic properties
SABIO-RK is a manually curated database for biochemical reactions and their kinetic properties that is built for the needs of modellers. It describes participants and modifiers of the reactions, as well as measured kinetic data embedded in their experimental and environmental context. The structured and standardized data for metabolic and signalling reactions manually extracted from literature is annotated and linked to controlled vocabularies, databases and biological ontologies. SABIO-RK can be accessed via the database web interface offering full text and advanced search, and via web services for an automatic data search and integration into e.g. modelling and simulation tools. Data can be exported in standardized formats like SBML, SBPAX or simply in table or text formats.
Funding: Development and maintenance partially funded by de.NBI.