Educators:
Dr. Christiane Ehrt
Date:
11.06.2024
Location:
Spring School Structure-Based Computer-aided Drug Design (https://www.sib.swiss/training/course/20240609_CADD),
Lausanne, Switzerland
Contents:
Introduction to Structure-Based Design on ProteinsPlus: Exploring Structures with Protoss, EDIA, SIENA and MicroMiner, Predicting Binding Sites with DoGSite3, Exploring Protein-Ligand Interactions with PoseEdit and GeoMine
Learning goals:
- Learning to perform protein structure analyses
- Protein ensemble generation
- Binding site characterization
- Protein-ligand interaction analysis
Prerequisites:
basic knowledge on protein structures, binding sites, and their interactions with small molecules
Keywords:
structure-based drug design, protein structure analysis, small molecule binding sites, protein-ligand interactions
Tools:
https://proteins.plus - ProteinsPlus web server tools (Structure Analysis: Protoss, EDIA, SIENA,MicroMiner; Binding Site Prediction: DoGSite3, Protein-Ligand Interaction Analysis: PoseEdit, GeoMine)
Contact: