Educators:
Steffen Neumann (CIBI; MASH), Guillaume Patoine (metaRbolomics4Galaxy)
Date:
23.06.2026 @ 14-16
Location:
Halle (Saale) & Online
Information on travel and accommodation:
https://www.ipb-halle.de/en/contact/directions-for-visitors
Content & Workshop goals:
MetaboLights is the most important open-access repository for metabolomics data; hosted by EMBL-EBI. It hosts high-quality metabolomics studies across species and techniques; enabling:
- Curation and quality controlof submitted data
- Rich; standardized metadatathat supports reproducibility
- Easy metadata exploration and analysisfor downstream research
Because of its curated content and powerful metadata structure; MetaboLights is the go-to platform for both data submission and data re-use in metabolomics.
We will guide you through the key features and practical use of MetaboLights in three 40-minute blocks:
- Introduction & Submission: Overview of MetaboLights; How to prepare and submit your own data
- Data Re-Use from MetaboLights: Retrieving and exploring datasets; Using Galaxy and MetaboAnalyst for downstream analysis
- Bring Your Own Data: Hands-on session to apply what you’ve learned to your own datasets
Prerequisites:
Laptop; understanding in Metabolomics
Keywords:
Metabolomics; mass spectrometry;
Registration:
https://forms.gle/XBCDZybQRJT7NNPUA
Contact: