Educators:
Björn Grüning, Wolgang Maier, Simon Bray (RBC), Anton Nekrutenko, Peter van Heusden, Erik Hjerde, Annbjørg Barbakken, Kjell Petersen
Date:
August 9-12, 2021
Location:
Online Training
Content:
It will be a 4-day event introducing scalable and reproducible SARS-CoV-2 data analysis with Galaxy. The sessions will be pre-recorded and provided in advance. During the workshop, there will be live support in chat and live Q&A sessions, in which experts will answer questions. Topics are:
- Introduction to Galaxy
- Data Upload & Data Quality
- SARS-CoV-2 Data Analysis on Public Datasets
- Visualisation & Data Export
Learning Goals:
The goal of this workshop is to build capacity in SARS-CoV-2 data analysis and data management, including data submission to ENA. After the workshop, all participants will be able to upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments.
Prerequisites:
None. Open for everybody, but the target audience is clinicians and researchers that deal with SARS-CoV-2 sequencing data.
Keywords:
Galaxy, SARS-CoV-2, ENA,
Tools:
Galaxy (https://usegalaxy.eu)
Contact:
Registration:
https://docs.google.com/forms/d/e/1FAIpQLSeADQn0PdzfFppwoOGFAqWQglnKRhj3FNcqpUKggwXsn2PKBg/viewform?usp=sf_link