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de.NBI – German Network for Bioinformatics Infrastructure
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Services

The de.NBI Service Platform

All Services

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A main goal of de.NBI is to provide excellent bioinformatics services and resources for life sciences research in academia and industry. de.NBI maintains and develops almost 100 software tools and four internationally recognized databases. In this section, the eight de.NBI units provide brief overviews of their de.NBI services including links to webpages and contact details.

License information can be retrieved from the respective site in bio.tools registry or the linked tool website.

Articles
CellNetAnalyzer for python (CNApy) - an advanced graphical user interface for exploration and computational analysis of metabolic network models 
ChrAccR - R package for the comprehensive analysis of chromatin accessibility data
circlize - visualization of huge amounts of information
Cloud-based data analysis in metabolomics (PhenomeNal)
CloWM - The Cloud based Workflow Manager
COPASI - Creating and solving mathematical models of biological processes
Crop Analysis Tools Suite (CATS)
CWLab - simplified deployment of the Common Workflow Language using a GUI
DecompPipeline - A preprocessing pipeline for preparing DNA methylation data for MeDeCom
DELLY - workflow for the discovery of germline and somatic structural variants

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The de.NBI Service Platform

The de.NBI services include, among others, the analysis of high-throughput genomics, transcriptomics and proteomics data, as well as bioinformatics and statistical support for research projects, algorithm development, and access to computational resources.

If you need further information on a tool, pipeline or database, or if you require consulting services or if you would like to provide feedback on our services, please contact us!

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The German Network for Bioinformatics Infrastructure – de.NBI is a national infrastructure supported by the Federal Ministry of Education and Research.

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