Bakta is a tool for the rapid & standardized annotation of bacterial genomes and plasmids from both isolates and MAGs. It provides DBXref-rich, sORF-including and taxon-independent annotations in machine-readable JSON & bioinformatics standard file formats for automated downstream analysis. It is available as a scalable web service as well as a local command line tool via Docker and Conda.

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Funding: Neither development nor maintenance funded by de.NBI