Center for Integrative Bioinformatics (CIBI)

EPIFANY - Bayesian protein inference
Fiji - An image processing package
FLASH Suite - A Comprehensive Toolbox for Top-Down MS Data Analysis
HLA Ligand Atlas - Large scale analysis of human HLA ligands
KNIME - A modern platform for data analytics
MassBank - repository of mass spectra of small chemical compounds
MetFrag - In silico fragmentation for computer assisted identification of metabolite mass spectra
MHCquant - A Workflow for Identification and Quantification of HLA Ligands
OpenMS - A C++ library for LC/MS data management and analyses
ProteomicsLFQ - Large scale analysis workflow for label free analysis
quantMS - OpenMS in the quantMS workflow
SeqAn - A C++ library for the analysis of sequences