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de.NBI – German Network for Bioinformatics Infrastructure
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Services

The de.NBI Service Platform

Center for Integrative Bioinformatics (CIBI)

Title
EPIFANY - Bayesian protein inference
Fiji - An image processing package
FLASH Suite - A Comprehensive Toolbox for Top-Down MS Data Analysis
HLA Ligand Atlas - Large scale analysis of human HLA ligands
KNIME - A modern platform for data analytics
MassBank - repository of mass spectra of small chemical compounds
MetFrag - In silico fragmentation for computer assisted identification of metabolite mass spectra
MHCquant - A Workflow for Identification and Quantification of HLA Ligands
OpenMS - A C++ library for LC/MS data management and analyses
ProteomicsLFQ - Large scale analysis workflow for label free analysis
quantMS - OpenMS in the quantMS workflow
SeqAn - A C++ library for the analysis of sequences
  • Toolboxes
  • Services by Service Centers
    • Bielefeld-Gießen Resource Center for Microbial Bioinformatics (BiGi)
    • Bioinformatics for Proteomics (BioInfra.Prot)
    • Center for Biological Data (BioData)
    • Center for Integrative Bioinformatics (CIBI)
    • de.NBI Systems Biology Service Center (de.NBI-SysBio)
    • German Crop BioGreenformatics Network (GCBN)
    • Heidelberg Center for Human Bioinformatics (HD-HuB)
    • RNA Bioinformatics Center (RBC)
    • Associated Partners
  • Services by Categories
  • Services by Organism
  • Industrial Forum Services
  • bio.tools
  • Competence Areas
  • Guidelines for Service Selection
  • KPI Cheat Sheet

The de.NBI Service Platform

The de.NBI services include among others the analysis of high-throughput data in genomics, transcriptomics and proteomics, bioinformatics and statistical support of research projects, the development of algorithms and access to computational space.

If you need further information on a tool, pipeline or database, consulting, or give feedback to our services, please contact us!

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