Galaxy Image Analysis
Galaxy Image Analysis enables web-based and cloud-based analysis of cell microscopy images and quantification of cellular phenotypes. The service provides tools and workflows for image enhancement, cell segmentation, feature extraction, image registration, object tracking, visualization, and performance evaluation. By building on the European Galaxy server and its HPC infrastructure, Galaxy Image Analysis supports reproducible and accessible image analysis workflows for high-content and high-throughput microscopy data.
Key Benefits
Supports creation, provision, and maintenance of image analysis workflows
Enables web-based analysis without local software installation
Uses HPC infrastructure provided through the European Galaxy server
Provides reproducible workflows for microscopy image analysis
Supports FAIR4RS-aligned software and workflow practices
Applications
Automated analysis of microscopy image data
High-content and high-throughput cellular phenotype analysis
Cell segmentation, cell counting, feature extraction, and object tracking
Registration of multi-modal microscopy images
Analysis of temporal live-cell microscopy data
Intended use
Galaxy Image Analysis is intended for bioimage analysts, researchers in microscopy, cell biologists, bioinformaticians, and life science researchers who need accessible and reproducible workflows for automated image analysis. The software is particularly suited for users working with fluorescence microscopy data, histological microscopy images, live-cell image data, or multi-modal microscopy data who want to quantify cellular phenotypes and spatial or temporal information.
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