Oliver Kohlbacher, Julianus Pfeuffer (CIBI)

January 12, 2017

EuBIC Winter School 2017 (10th - 13th January 2017)
Sporthotel Semmering, Austria
Please register at:

The workshop provides a brief introduction to OpenMS, an open-source software for computational proteomics and metabolomics. Participants will familiarize themselves with the underlying concepts and get to know a few key tools of the OpenMS tool collection. We will construct tailor-made automated data analysis workflows for database search, label-free quantification, data visualization and quality control in proteomics. These workflows will be applied to selected example datasets. Particpants are encouraged to bring their own data and discuss the analyses required with instructors from the OpenMS team. All software used will be provided and can be installed on particpants' own computers.

Target audience:
Target audience are experimental scientists with experience in proteomic and/or metabolomic research as well as computational scientists interested in working with raw mass spectrometric data.

Software Requirements:
The participants should bring their own laptop computers. Instructions regarding downloading and installing all required software (Windows, OSX, or Linux) will be provided prior to the course. Installer versions of all required software will be available.

LC-MS based proteomics and metabolomics, OpenMS, workflows, KNIME, data analysis, quality control


Scientific and program questions:
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