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de.NBI – German Network for Bioinformatics Infrastructure

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  • quantMS - OpenMS in the quantMS workflow

  • QuPE - framework for quantitative proteomics experiments

  • ReferenceSeeker - determination of closely related reference genomes

  • rGREAT - Automatic Genomic Regions Enrichment of Annotations Tool (GREAT)

  • rhdf5 / Rhdf5lib - an interface between HDF5 and R

  • Rightfield - A tool for adding ontology term selection to Excel spreadsheets

  • rippchen: Differential analyses pipelines

  • RNA-seq end-to-end workflow

  • RnBeads - R package for comprehensive analysis of DNA methylation data

  • Roddy - a framework for large scale NGS processing

  • SABIO-RK - A database for biochemical reactions and their kinetic properties

  • SABIO-RK Service for kinetic data extraction

  • SANS - Tool for phylogenetic reconstruction

  • SearchGUI - Management tool for peptide search engines

  • SEEK/FAIRDOMHub - A software platform for collaborative projects to support the data storage and data exchange between project partners

  • segemehl: Short read mapping

  • SeqAn - A C++ library for the analysis of sequences

  • shournal: Shell monitoring

  • SIAMCAT - modular framework for the statistical inference of associations between microbial communities and host phenotypes

  • SIDER - resource that contains information on marketed medicines and their recorded adverse drug reactions

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