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MediaDive - The world's largest collection of cultivation media
MeltDB - framework for the analysis of for raw GC- and LC-MS metabolome data sets
Mercator - annotate and classify plant protein and DNA sequences
Metabolomics data management and deposition (MetaboLights)
Metagenomics Toolkit – scalable, data-agnostic workflow for the automated analysis of metagenomic datasets
Metaproteomics Consulting – From Study Design to Bioinformatic Analysis
MetFrag - In silico fragmentation for computer assisted identification of metabolite mass spectra
methylKit - R package for DNA methylation analysis and annotation from high-throughput bisulfite sequencing
MHCquant - A Workflow for Identification and Quantification of HLA Ligands
MOFA – Multi-Omics Factor Analysis
MPA Cloud - MetaProteomeAnalyzer - identification of taxonomic and functional relationships between identified proteins
NGLess - domain-specific language for next-generation sequencing data processing
OmniPath - database of causal protein-protein interactions
OpenMS - A C++ library for LC/MS data management and analyses
OTP - comprehensive framework for NGS project organization and processing
PanCancer alignment workflow
PANGAEA - A Data Publisher for Earth & Environmental Science
PeptideShaker - Proteomics analysis suite for quality control, identification and quantification
PIA - toolbox for MS based protein inference and identification analysis
PiGx - Reproducible workflows for genomics

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