PubPlant
PubPlant is a continuously updated online resource that catalogs fully sequenced plant genomes published in peer-reviewed scientific journals. It provides interactive cladograms, timelines, and overview visualizations to explore the development and taxonomic distribution of published plant genome projects. PubPlant includes high-quality genome assemblies from the Archaeplastida group, including land plants and primary algae, provided that the assemblies contain structural gene annotations.
Key benefits
Continuously updated catalog of published plant genomes
Focus on peer-reviewed, fully sequenced plant genome assemblies
Inclusion criteria require high-quality assemblies and structural gene annotation
Interactive cladograms and timelines for exploring plant genome publications
Useful overview of genome sequencing progress across Archaeplastida
Applications
Searching for published plant genome assemblies
Exploring the taxonomic distribution of sequenced plant genomes
Tracking the chronology of plant genome publications
Identifying reference publications for plant genome projects
Supporting comparative plant genomics and genome resource surveys
Intended use
PubPlant is intended for plant scientists, genome researchers, bioinformaticians, comparative genomics researchers, and database curators who need an overview of published plant genome resources. It is particularly suited for users who want to identify sequenced plant species, explore genome publication trends, or retrieve references for peer-reviewed plant genome assemblies.
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