Human Omics Analysis Toolbox
The Human Omics Analysis Toolbox is a collection of web resources and R/Bioconductor packages designed to facilitate analysis and interpretation of high-throughput omics data. This toolbox provides a suite of tools for working with proteins, drug reactions, gene expression analysis, proteome profiling, and assessing MinION Data.
Key Features
- Protein domain annotation and architecture exploration
- Adverse drug reaction information and classification
- Differential expression analysis of high-throughput sequencing data
- Alternative exon usage analysis
- Image processing and analysis for high-throughput microscopy-based cellular assays
Tools
| SMART (Simple Modular Architecture Research Tool): A web resource providing simple identification and extensive annotation of protein domains via sequence homology searches. |
| SIDER: A web-based resource containing information on marketed medicines and their recorded adverse drug reactions. |
| DESeq2: An R/Bioconductor package for differential expression analysis of high-throughput sequencing assays. |
| DEXSeq: An extension of DESeq for the analysis of alternative exon usage. |
| EBImage: An R/Bioconductor package providing general purpose functionality for image processing and analysis. |
Benefits
- Facilitates the interpretation of complex omics data
- Provides insights into protein function, structure, and interactions
- Supports the discovery of novel drug targets and biomarkers
- Enhances the understanding of gene expression regulation and alternative splicing
- Enables the analysis of high-throughput imaging data for cellular phenotyping
Access
The Human Omics Analysis Toolbox is freely available to researchers. Each tool can be accessed separately through its own website or through the de.NBI portal.
By providing this suite of tools, the Human Omics Analysis Toolbox aims to support the advancement of research in human omics and facilitate the translation of discoveries into clinical applications.
If you have used a Service from this toolbox, please take 2 minutes to fill in our survey: https://de.surveymonkey.com/r/denbi-service?sc=hd-hub&tool=humanomicsanalysistoolbox