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de.NBI – German Network for Bioinformatics Infrastructure
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Services

The de.NBI Service Platform

All Services

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A main goal of de.NBI is to provide excellent bioinformatics services and resources for life sciences research in academia and industry. de.NBI maintains and develops almost 100 software tools and four internationally recognized databases. In this section, the eight de.NBI units provide brief overviews of their de.NBI services including links to webpages and contact details.

License information can be retrieved from the respective site in bio.tools registry or the linked tool website.

Articles
segemehl: Short read mapping
SemLookP - metadata annotation & data search in the area of translational medicine
SeqAn - A C++ library for the analysis of sequences
shournal: Shell monitoring
SIAMCAT - modular framework for the statistical inference of associations between microbial communities and host phenotypes
SIDER - resource that contains information on marketed medicines and their recorded adverse drug reactions
SILVA - A comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data.
SILVAngs - A data analysis service for ribosomal RNA gene (rDNA) amplicon reads from high-throughput sequencing (NGS) approaches
slalom - scalable modelling framework for single-cell RNA-seq data
SMART - resource providing simple identification and extensive annotation of protein domains via sequence homology searches

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  • Toolboxes
  • Services by Service Centers
  • Services by Categories
  • Services by Organism
    • Tools for Human Data
    • Tools for Microbial Data
    • Tools for Plant Data
  • Industrial Forum Services
  • bio.tools
  • Competence Areas
  • Guidelines for Service Selection
  • KPI Cheat Sheet

The de.NBI Service Platform

The de.NBI services include among others the analysis of high-throughput data in genomics, transcriptomics and proteomics, bioinformatics and statistical support of research projects, the development of algorithms and access to computational space.

If you need further information on a tool, pipeline or database, consulting, or give feedback to our services, please contact us!

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The German Network for Bioinformatics Infrastructure – de.NBI is a national infrastructure supported by the Federal Ministry of Education and Research.

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