• HelpDesk
  • Contact
  • Intranet
  • Search
de.NBI – German Network for Bioinformatics Infrastructure
de.NBI
  • de.NBI
  • ELIXIR-DE
  • Services
  • Training
  • de.NBI Cloud
  • News

Services

The de.NBI Service Platform

Bielefeld-Gießen Resource Center for Microbial Bioinformatics (BiGi)

ASA³P - assembly, annotation and higher-level analysis pipeline
Bakta - Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
BiBiServ Tools
BIIGLE - Image and Video Annotation
ECF Hub - Extracytoplasmic function sigma factors classification
EDGAR - comparative genomics platform
EMGB - CWL-based workflow for metagenomics analyses
Fusion - a platform for integrative analysis of omics data
GenDB - a genome annotation system for prokaryotic genomes
GenDBE - a genome annotation system for eukaryotic genomes
MeltDB - framework for the analysis of for raw GC- and LC-MS metabolome data sets
MetaProteomeAnalyzer - identification of taxonomic and functional relationships between identified proteins
MGX - analysis and interpretation of environmental community sequence data
PLAST - Pangenome Local Alignment Search Tool
Platon - detection of plasmid contigs within bacterial draft genomes
QuPE - framework for quantitative proteomics experiments
ReferenceSeeker - determination of closely related reference genomes
SANS - Tool for phylogenetic reconstruction
WASP - management, analysis and interpretation of scRNA-seq high-throughput data
  • Services by Organism
  • Services by Categories
  • Services by Service Centers
    • Bielefeld-Gießen Resource Center for Microbial Bioinformatics (BiGi)
    • Bioinformatics for Proteomics (BioInfra.Prot)
    • Center for Biological Data (BioData)
    • Center for Integrative Bioinformatics (CIBI)
    • de.NBI Systems Biology Service Center (de.NBI-SysBio)
    • German Crop BioGreenformatics Network (GCBN)
    • Heidelberg Center for Human Bioinformatics (HD-HuB)
    • RNA Bioinformatics Center (RBC)
    • Associated Partners
  • bio.tools
  • Competence Areas
  • Guidelines for Service Selection
  • KPI Cheat Sheet
  • Industrial Forum Services

The de.NBI Service Platform

The de.NBI services include among others the analysis of high-throughput data in genomics, transcriptomics and proteomics, bioinformatics and statistical support of research projects, the development of algorithms and access to computational space.

If you need further information on a tool, pipeline or database, consulting, or give feedback to our services, please contact us!

Write E-Mail

  • de.NBI
  • ELIXIR-DE
  • Services
  • Training
  • de.NBI Cloud
  • News
  • Home
  • Helpdesk
  • Contact
  • Intranet
  • Downloads
  • Privacy Policy
  • Imprint
de.NBI – German Network for Bioinformatics Infrastructure

contact@denbi.de Follow us on twitter

The German Network for Bioinformatics Infrastructure – de.NBI is a national infrastructure supported by the Federal Ministry of Education and Research.

Follow us on twitter Follow us

Tweets

Tweets by denbiOffice
Projektträger Jülich Forschungszentrum Jülich Bundesministerium für Bildung und Forschung ELIXIR-Germany
© 2023 de.NBI – All Rights Reserved. Imprint Privacy Policy