Curare
Curare is a freely available analysis pipeline designed for reproducible, high-throughput bacterial RNA-Seq experiments. It enables researchers to define standardized analysis workflows tailored to their specific experimental design, without the need to manually install and configure all required tools. Curare integrates commonly used RNA-Seq analysis steps into a coherent, customizable pipeline framework.
Key benefits
- Standardized and reproducible RNA-Seq analysis workflows
- Designed specifically for bacterial transcriptomics
- No need for manual installation of all individual tools
- Customizable pipeline configurations adapted to specific research questions
- Facilitates transparent and comparable high-throughput analyses
Applications
- Processing and analysis of bacterial RNA-Seq datasets
- Read mapping and transcript quantification
- Differential gene expression analysis
- Standardized workflow definition for reproducible research
- Integration into larger bioinformatics analysis strategies
Intended use
Curare is intended for researchers in microbiology, transcriptomics, and computational biology who conduct bacterial RNA-Seq experiments and require a reproducible, customizable, and streamlined analysis workflow. Basic bioinformatics knowledge and familiarity with RNA-Seq concepts are recommended.
More information:
Curare website