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de.NBI – German Network for Bioinformatics Infrastructure
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Services

The de.NBI Service Platform

All Services

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A main goal of de.NBI is to provide excellent bioinformatics services and resources for life sciences research in academia and industry. de.NBI maintains and develops almost 100 software tools and four internationally recognized databases. In this section, the eight de.NBI units provide brief overviews of their de.NBI services including links to webpages and contact details.

License information can be retrieved from the respective site in bio.tools registry or the linked tool website.

Articles
de.STAIR-Rostock - TRAPLINE: A tool for RNAseq data processing
de.STAIR-Rostock - TriplexRNA: A database of cooperating miRNAs and mutual targets
DecompPipeline - A preprocessing pipeline for preparing DNA methylation data for MeDeCom
DELLY - workflow for the discovery of germline and somatic structural variants
DESeq2 - R/Bioconductor package for differential gene expression analysis
DEXSeq - analysis of alternative exon usage
DIEGO: Differential splicing
Dorothea - human and mouse TF regulons
E-CRISP - Design of CRISPR constructs
e!DAL-PGP - Plant Genomics and Phenomics Research Data Repository

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    • de.NBI Systems Biology Service Center (de.NBI-SysBio)
    • German Crop BioGreenformatics Network (GCBN)
    • Heidelberg Center for Human Bioinformatics (HD-HuB)
    • RNA Bioinformatics Center (RBC)
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de.NBI – German Network for Bioinformatics Infrastructure

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The German Network for Bioinformatics Infrastructure – de.NBI is a national infrastructure supported by the Federal Ministry of Education and Research.

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