Tools for Human Data

DEXSeq - analysis of alternative exon usage
DIEGO: Differential splicing
Dorothea - human and mouse TF regulons
E-CRISP - Design of CRISPR constructs
EBImage & RBioFormats - R/Bioconductor packages that provide general purpose functionality for the reading, writing, processing and analysis of images
eggNOG - database of nested orthologous gene groups (NOGs)
EnrichedHeatmaps - visualize enrichment of genomic signals on specific target regions
Enterotyping - determine enterotypes in new studies
EPIFANY - Bayesian protein inference
FactorViz - A graphical user interface for interpretation of deconvolution results of MeDeCom
FLASH Suite - A Comprehensive Toolbox for Top-Down MS Data Analysis
Galaxy Image Analysis - Workflows and tools for analysis of microscopy image data and cellular phenotyping
Galaxy Workflow Generator
Gear / Tracy - genome analysis server
GenomeCRISPR - database for high-throughput screening experiments performed by using the CRISPR/Cas9 system
GenomeRNAi - database for RNAi phenotype data
GLASSgo - finding sRNA homologs
Goslin - Tool for lipid shorthand name parsing and normalization
gtrellis - Genome level Trellis graph
haarz: Adaptive variant caller

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